BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025A08SP1|AL428316
(865 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1620 1709 0.0
>3x_Contig1620
Length = 12263
Score = 1709 bits (862), Expect = 0.0
Identities = 862/862 (100%)
Strand = Plus / Plus
Query: 4 agataatttcaccatagaaaagtcaggatttacagtgatggacgcattaggagcaacagt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 agataatttcaccatagaaaagtcaggatttacagtgatggacgcattaggagcaacagt 647
Query: 64 aggcgtttcaaattctatgtttatcgagaactcaccatttggcatcagttttcttatgac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 aggcgtttcaaattctatgtttatcgagaactcaccatttggcatcagttttcttatgac 707
Query: 124 tgacggactggcatatggaactatttgttgtttcacttgtatttcagttatctgtggttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 tgacggactggcatatggaactatttgttgtttcacttgtatttcagttatctgtggttt 767
Query: 184 gttttcagttacaagcacctgtgcttgtttggttgtaatggcagattttgaagatttctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gttttcagttacaagcacctgtgcttgtttggttgtaatggcagattttgaagatttctt 827
Query: 244 catatgtgcctcggatattagctgttcttgtaacgctctttccttttgtctcttgaattt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 catatgtgcctcggatattagctgttcttgtaacgctctttccttttgtctcttgaattt 887
Query: 304 aatctcttctttcctcttgatctgagcctctatgcgagaaatgtagcccatgagactttc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 aatctcttctttcctcttgatctgagcctctatgcgagaaatgtagcccatgagactttc 947
Query: 364 ttcaaggttcactggtttgattgaattcaaatctattaactttttaacagatttattcat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 ttcaaggttcactggtttgattgaattcaaatctattaactttttaacagatttattcat 1007
Query: 424 ttgtgcttgagaagataaagtgtttctcttcatttttaatagcttttcgggattatctgt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 ttgtgcttgagaagataaagtgtttctcttcatttttaatagcttttcgggattatctgt 1067
Query: 484 cgctgcgtacgctgtttagtgattgattccgtatctatcactagttcccagtccagattt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1068 cgctgcgtacgctgtttagtgattgattccgtatctatcactagttcccagtccagattt 1127
Query: 544 tttgaaaaggcctgattagtggaacaacaaattgcctgttcgtcattatcctccagtaag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1128 tttgaaaaggcctgattagtggaacaacaaattgcctgttcgtcattatcctccagtaag 1187
Query: 604 tcctttatcgcaccctggaccgatgaagaactactaccataaagttgtcttaaaacatcg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1188 tcctttatcgcaccctggaccgatgaagaactactaccataaagttgtcttaaaacatcg 1247
Query: 664 ataggagatgaccatctaataccgtaacgcctccacatccttgcacatcttatacaaagg 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1248 ataggagatgaccatctaataccgtaacgcctccacatccttgcacatcttatacaaagg 1307
Query: 724 gcattcagtttctcattatctttttcaacctgtttggctttctcgctatcactacctgaa 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1308 gcattcagtttctcattatctttttcaacctgtttggctttctcgctatcactacctgaa 1367
Query: 784 actttttcatttactccggtcgtaagtcttctatgaatgtgatcatcctctgacccacca 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1368 actttttcatttactccggtcgtaagtcttctatgaatgtgatcatcctctgacccacca 1427
Query: 844 gtaaccctataccataatggtg 865
||||||||||||||||||||||
Sbjct: 1428 gtaaccctataccataatggtg 1449
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6994
Number of Sequences: 1807
Number of extensions: 6994
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 865
length of database: 10,358,551
effective HSP length: 16
effective length of query: 849
effective length of database: 10,329,639
effective search space: 8769863511
effective search space used: 8769863511
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)